Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs2292573 chr11:78053139 A/G 0.000175 288 26.37 21.82 23.23 KM Plot
KIRP rs2292954 chr16:89613123 A/G 0.000172 282 25.67 26.37 17.13 KM Plot
KIRP rs2303275 chr16:74499589 G/A 1.86E-5 287 24.67 29.2 17.13 KM Plot
KIRP rs2306459 chr1:53554305 A/G 6.08E-5 289 10.57 23.6 26.37 KM Plot
KIRP rs230722 chr14:65317873 T/G 1.12E-9 288 5.1 14.53 26.57 KM Plot
KIRP rs2309795 chr2:100954290 G/A 2.18E-5 287 23.32 25.97 25.5 KM Plot
KIRP rs2309796 chr2:100954385 C/T 2.18E-5 287 23.32 25.97 25.5 KM Plot
KIRP rs2309798 chr2:100956949 G/A 2.18E-5 287 23.32 25.97 25.5 KM Plot
KIRP rs232843 chr1:59040087 G/A 3.17E-5 280 25.65 26.83 7.07 KM Plot
KIRP rs232845 chr1:59039349 A/C 3.17E-5 280 25.65 26.83 7.07 KM Plot
KIRP rs232846 chr1:59039305 T/C 3.17E-5 281 25.65 26.2 7.07 KM Plot
KIRP rs2342634 chr6:168980763 C/T 0.000179 285 25.95 26.7 18.2 KM Plot
KIRP rs235318 chr21:46276825 G/A 3.63E-9 282 26.4 24.2 18.52 KM Plot
KIRP rs235323 chr21:46278047 G/C 3.63E-9 282 26.4 24.2 18.52 KM Plot
KIRP rs2369526 chr1:205054406 C/T 7.62E-5 289 23.02 28.03 23.1 KM Plot